Installation¶
PyPlr is registered on PyPI, which means the latest version can be installed easily via the pip packaging tool (this will also install the dependencies automatically):
$ pip install pyplr
(link to the PyPI project page).
The latest development version can also be installed from GitHub with pip:
$ pip install git+https://github.com/PyPlr/cvd_pupillometry.git
Alternatively, you can clone from from git and install with setuptools:
$ git clone https://github.com/PyPlr/cvd_pupillometry.git PyPlr
$ cd PyPlr
$ python setup.py install
If you want to make changes to the code and have those changes instantly available on sys.path you can use setuptools’ develop mode:
$ python setup.py develop
Requirements¶
PyPlr requires Python3 and a set of standard numerical computing packages, all of which are listed in requirements.txt:
matplotlib==3.3.4
msgpack==1.0.2
numexpr==2.7.2
numpy==1.19.1
pandas==1.2.2
pyzmq==22.0.2
requests==2.24.0
scipy==1.6.0
seaborn==0.10.1
seabreeze==1.1.0
tables==3.6.1
The following additional packages may also be helpful for development:
All requirements can be installed by running pip install -r requirements.txt.
Virtual environments¶
We recommend installing PyPlr in a virtual environment. This can be done using either Python’s virtual environments or conda:
$ conda create -n pyplr python=3.7.7
$ conda activate pyplr
$ python setup.py install
Notes/Potential Issues¶
We are aware of the following:
psychopy thread issue - revert to pyglet=1.4.10
Tables and indices
